الأحد، مايو 16، 2021

GRAM NEGATIVE BACILLI

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

GRAM NEGATIVE BACILLI


spp Salmonella

 

 

 

Characteristics

·         Gr –ve bacilli

·         Non sporing , motile bacilli

·         All exept S.typhi are non – capsulate bacilli

·         Facultative anaerobes

 

Habitat

·         Animal gut

·         Human is the only natural host for S. typhi & S paratyphi

Transmission

·         Foodborne roote

·         Faecal-oral route

 

 

 

 

 

Pathogenesis

·         Endotoxin=cause fever , leukemia , hypotension &shock

·         Capsule=antiphagocytosis

·         Can survive within macrophages

 

 

Diseases

·         Typhoid fever (Enteric fever)

1.      bacteria rich small intestine and then enter lymphatics& blood streem

2.      cause fever , malaria , headache , constipation etc

3.      spleen &liver become enlarged

·         Enterocolitis (gastroenteritis or food poisoning )

·         septicemia

 

Laboratory Identification

·         Oxidase – ve , non –lactose fermentation

·         Produce acid &gas from glucose

·         Grow well on macConnkey agar , DCA , .S.S agar

·         Commercial kits available for full identification


Shigella

 

 

 

Characteristics

·         Gram –Ve bacillus

·         Faculitatie anaerobic

·         Most shigella pathogen is S.sonnei

·         Non lactose fermentive .

·         Non motile .

 

Pathogenesis

·         Endotoxin

·         Capsule

·         Antigenic phase variation .

 

 

 

Diseases

·         Gastroenteritis (( shigellosis ))

·         S.dysenteriae cause bacterial dysenteria

 

Laboratory Identification

·         Oxidase – Ve

·         Isolation from specimens requires use of selective media .


 

Vibrio

 

 

 

-the second major group of gram-negative ,facultative anaerobic, fermentative rods.

 

- Were separated from Enterobacteriaceae on the basis of positive oxidase reaction and the presence of polar flagella.

 

 

-the most important members of Vibrio spp are:

1) Vibrio cholera.

2) Vibrio parahaemolyticus. 3)Vibrio vulnificus.

 

-Vibrio species can grow on a variety of simple media within temp rate (14-40C).

 

V.cholerae can grow in the absence of salts(most other species of vibrio that are pathogenic in human require salt [halophilic species]).

 

-Vibrio tolerate a wide range of PH (e.g.PH of 6.5-9.0) but are susceptible to stomach acids. If gastric acid production is reduced or neutralized , patients are more susceptible to Vibrio infection.

 

-most vibrio have asingle polar flagella (in contrast with peritrichous flagella in the family Enterobacteriaceae.

 

-vibrio have also various pili that are important for virulence.

 

-epidemic strains of V.cholerae the etiologic agent of cholera


cholerae Vibrio

 

 

 

Characteristics

·         Small , curved (comma – shapped )

·         Gr –ve bacilli

·         Non sporing , motile bacilli , non capsulate bacilli

·         Facultative anaerobes

·         Were separated from Enterobacteriaceae on the

basis of positive oxidase reaction and the presence of polar flagella.

Habitat

·         Contaminated water (usually) or food (sometimes )

 

Transmission

·               Foodborne route

·         Faecal – oral route

 

Pathogenesis

·         Choleragen enterotoxin = hypersecretion of electrolytes andwater.

 

 

 

Diseases

·         Cholera

1.      bacteria colonize the intestinal tract in very high numbers

2.      bacteria attach to but do not invade the intestinal mucosa

3.      intese vomiting & diarrhea

4.      severe loss of water &electrolytes

*gastroenteritis

 

Laboratory Identification

·         Oxidase +ve

·         Commercial kits available for full identification

·         Special selective media for vibrio thiusulfate citrate bile salts sucrose(TCBS).

·         Do not require salts for growth. But can tolerate

it.


 

 

·         Vibrio cholerae are rarely seen in Gram-stained stool or wound specimens.

·         By using darkfield microscope may able to detect the motile bacteria in stool specimen.


 

 

 

 

 

Enterobacteriaceae SPP.

 

 

-the family Enterobacteriaceae is the largest, most heterogeneous collection of medically important gram-negative rods.

 

-fewer than 20 species are responsible for more than 95% of the infection.

 

-Enterobacteriaceae are ubiquitous organisms, found worldwide in soil,water,vegetation.

 

-Enterobacteriaceae part of the normal intestinal flora of most human.

 

-these bacteria cause a variety of human diseases including 30-35% of all septicemia, more than 70% of urinary tract infection , and many intestinal infections.

 

-some organisms(e.g.salmonella typhi, shiglla, yersinia pestis) are always associated with disease.

 

-while other organisms(e.g. E.coli, klebsiella pneumoniae, protus mirabilis) are members of the normal commensal flora that can cause opportunistic infections.


 

 

-members of the Enterobacteriaceae family are moderately in size, gram-negative rods .

 

-they share a co

mmon antigen (enterobacterial common antigen)

 

-are either nonmotile or motile with peritrichous flagella

 

-do not form spore.

 

-all members can grow rabidly, facultative anaerobic) on variety of nonselctive media(e.g.blood agar) and selective (e.g.macConkey agar).

 

-the Enterobacteriaceae have simple nutritional requirements, ferment glucose.

 

-catalase +ve, oxidase –ve.

-the absence of cytochrome oxidase activity is important characteristic , because it can be measured rabidly with simple test and is used to distinguish the Enterobacteriaceae from many other fermentative and nonfermentative gram-negative rods.

 

-a few exceptions to these rules exits (e.g. plesiomonas shigelloides is oxidase +ve, klebsiella


granulomatis can not be cultured on traditional media.

 

-the ability to ferment lactose has been used to differentiate lactose-fermenting strains(e.g.

Echerichia, klebsiella, enterobacter, citrobacter , serratia spp) from strains that do not ferment lactose or do so slowly(e.g. proteus, salmonella, shiglla, yersinia spp).

 

-resistance to bile salts in some selective media has been used to separate enteric pathogen(e.g. shigella, salmonella) from commensal organisms that are inhibited by bile salts(e.g. gram+ve and some gram-ve bacteria present in the gastrointestinal tract)

 

-some Enterobacteriaaceae have prominent capsules (e.g. most klebsiella, some Enterobacter, Escherichia strains),

 

-the heat-stable lipopolysaccharide(LPS) is the major cell wall antigen.

 

-most the Enterobaceriaceae are motile with the exception of the common isolates Klebsiella, shigella, yersinia.

 

-the motile strains posses peritrichous flagella.


-there are other species of Enterobacteriaceae : 1)Enterobacter

2)Citrobacter 3)Serratia 4)Morganella

-These species subdivide as lactose fermenter Enterobacteriaceae.

 

-these species caused infections rarely in immunocompetent patients.

 

-they are more common causes of immunocompromised patients.

 

-e.g. citrobacter koseri cause meningitis and brain abscesses in neonates.


coli Escherichia         

 

 

 

Characteristics

·         Gr –ve bacilli

·         Non sporing , motile , non capsulated bacilli but some strains are capsulate

·         Facultative anaerobes

Habitat

·         Common normal flora of human intestinal tract

 

Transmission

·         Foodborne route

·         Faecal – oral route

·         Endogenous spread

 

Pathogenesis

·         Endotoxin = cause fever , leucopenia

·         Capsule (in some strains ) = antiphagocytosis

·         Enterotoxin = cause diarrhea

 

 

Diseases

·         Urinary tract infection (UTI)

·         Diarrhoeal disease

·         Neonatal meningitis

·         Septicemia

·         Gastroenteritis.

 

Laboratory Identification

·         Oxidase –ve , lactose fermentive

·         Grow well on macConkey agar , DCA , XLD agar

·         Commercial kits available for full identification

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

                   

     spp Proteus

 

 

 

Characteristics

·         Gr –ve bacilli

·         Non sporing highly motile , non capsulate bacilli

·         Facultative anaerobes

·         P.mirabilis is the most common species.

·         Produce large quantitiesof urease.(this process raises the urine PH and facilitates the formation of renal stones , the increased alkalinity of the urine is also toxic.

Habitat

Common normal flora of the human intestinal tract

 

Transmission

·             Foodborne route

·         Faecal – oral route

·         Endogenous spread

 

Pathogenesis

Endotoxin = cause fever , leucopenia

 

Diseases

·         UTI

·         Septicemia

 

Laboratory Identification

·               Oxidase –ve , non lactose fermentive

·         Grow well on macConkey agar , DCA , XLD agar

·         Swarming colonies on solid media

·         Commercial kits available for full identification


pestis Yersinia

 

 

 

Characteristics

·        Gr –ve bacilli (cocobacilli ) (facultative anaerobes)

·        Have a tendency for bipolar staining (in which the endof the bacilli stain darker than the central part)

·        Nonsporing , non motile bacilli . capsulate bacilli

·        Some species (e.g.Y.enterocolitica) can grow at cold temp.

Habitat

·        Animal reservoirs are rodents such as rats

 

Transmission

·        Bacteria spreads between anmals by fleas

·        Major outbreaks in humans result from exposure to infected rats

·        The rat flea carries infection from rat to rat & from rat to human

·        Bubonic plague is not transmitted from person to person

·        Pneumonic plague spread from person to person by droplets (airborne route )

 

Pathogenesis

·        Intracellular murine toxin = causing irreversible shock and death

·        Capsule (f1) = antiphagocytosis

·        The V/M antigen = specific protein act as antiphagocytosis & promote intracellular growth of the bacteria


 

 

 

Diseases

PLAGUE :

1.     is normally azoonotic disease of rodents that exists in 2 kinds of epidemic centers

2.     permanent but relatively resistant rat population (wild rat)

3.     temporary but susceptible rat population (domestic rats )

4.     epidemics of plague usually occur in crowded areas poor sanitation

 

·        bubonic plague :

1.     bacteria multiply at the entery site in the skin

2.     bacteria spread via the lymphatics to lymph nodes

3.     2 to 6 days after the flea bite occurs , lymph nodes become very tender , and enlarge to form buboes with haemorrhagic inflammation

4.     death rate is about 75% in untread bubonic plague

·        pneumonic plague (black death) :

1.     bacteria disseminates from lymph nodes by

way of the


 

 

bloodstream to the spleen , liver ,l lungs

2.     pneumonic plague can be transmitted by respriatory route but Iis

 

3.     death tate is nearly 100%in untreaed pneumonic plague

 

Laboratory Identification

·        stained smears should show bipolar staining

·        organism can be grow from aspirtes of enlarged buboes , or from sputum in case of pneumonic plague

·        colonies are grayish , mucoid & rough colonies may be noted

·        the organism are not fastidious ; it can be rrown on routine media

·        oxidase –ve .


Pasteurella               

 

 

 

Characteristics

·         Garm –Ve bacillus

·         Non spore forming

·         Non motile

·         Faculitative anaerobic

·         Fermentative coccobacilli .

·         Most common P.multocida and P.canis

Habitat

 

 

Transmission

 

 

Pathogenesis

 

 

 

 

Diseases

·         Bite wound infection .

·         Chronic pulmonary disesase

·         Bacteremia

·         Meningitis

 

Laboratory Identification

·         Grow well in blood and choclate agar . and poorly in macConkey agar .

·         After over night incubation in blood agar large buttery colonies with musty odor cuase

by product indole


pneumoniae Klebsiella  

 

 

Characteristics

·         Gr –ve bacilli

·         Non sporing , non motile , prominent capsulate that responsible for the mucoid.

·         Facultative anaerobes

·         Formerly called (Donovaina granulomatis)

 

Habitat

·         Common normal flora of the human intestinal tract & oropharynx

 

Transmission

·         Foodborne route

·         Faecal – oral route

·         Endogenous spread

 

Pathogenesis

·         Endotoxin = cause fever , leucopenia

·         Capsule = antiphagocytosis

 

 

Diseases

·         UTI

·         Neonatal meningitis

·         Septicemia

·         Pneumonia (Rare )

 

·             Oxidase –ve , lactose fermentive

Laboratory Identification

·         Grow well on macConkey agar , DCA , XLD agar

 

·         Large mucoid colonies

 

·         Commercial kits available for full identification


spp Brucella             

Characteristics

·         Gr –ve small coccibacilli

·         Non sporing ,non motile , non capsulated bacilli

·         Intracellular pathogen

·         Slow growth requirements

·         Fastidious.

·         Is member of the alpha –proteobacteria group

·         Strictly aerobic

·         Does not ferment carbohydrates.

·         Four species:

1)Brucella abortus 2)Brucella melitensis. 3)Brucella suis     4)Brucella canis

 

Habitat

·         Chronic infection in domestic animals

 

Transmission

·         Contaminated milk or other unpasteurized dairy products

·         Direct contact

 

 

 

 

 

Pathogenesis

·         Invasion of the body by brucella results in lymphatic dissemination of the bacteria

·         As regional lymph nodes become infected , the brucella are phagocytized , but they are capable of survive & intracellular multiplication inside phagocytic cells

·         As phagocytic cells die , brucella , are released into the blood stream and intracellularly , establish localized infection in bone marrow , liver &spleen , and thus hide from host defence

 

 

 

Diseases

·         Undulant fever (malta fever or brucellosis )

1.      patients frequently present with PUO

2.      chronic , debilitating febrile illness usually without any localizing signs

3.      intracellularly , bacteria localize and cause


 

 

granulomas lesions in the spleen , liver bone marrow & lymph nodes

4.      patients presents with intermittent fever & profound weakness , chills , sweats , headache , backache

5.      two types of infection occur ; (acute infection ) or (chronic infection – lasting

12 months )

 

Laboratory Identification

·         requiring complex growth media like :glucose serum or liver infusion broth or agar

·         usuakky require 3-5 days incubation

·         blood provides the best material for culture

·         grow occasionally on MacConkey agar.

·         Oxidase +ve

·         Urease+ve


tularensis Francisella

 

 

 

Characteristics

·         Gr – Ve small bacilli (coccobacilli)

·         Often showing bipolar staining

·         Non motile , non sporing , capsulate , coccobacilli

·         Strick aerobic

·         Fastidious.

·         Two species of Francisella spp: 1)F.tularensis

2)F.philomiragia

*require cystein for growth.

 

Habitat

Widely found in animal reservoirs

Transmission

·         biting arthropods

·         direct contact with infected animal tissue

·         ingestion of contamination food or water

·         inhalation of aerosols

 

 

 

 

 

Pathogenesis

·         F.tularensis is highly infection ; penrtration of the skin or mucous membranes or inhalation of 50 organism can result in infection

·         F.tularensis is an intracellular pathogen of phagocytosis cells

·         Capsule= phagocytosis


 

 

Diseases

·         tularemia (sometimes called rabbit fever or glandular fever or tick fever or deer fly fever ):

1- clinical presentation dependes on the route of infection

2-   a plague – like disease of rodents

 

Laboratory Identification

·         blood is taken for serological tests

·         growth dose not occur in most ordinary bacteriological media but small colonies appear in 1-3 day on glucose , blood agar incubated at 37 C under aerobic conditions

·         culture on cystein-supplemented media(e.g.choclate agar, BCYE agar ) is specific.

·         Culture on cystin blood agar.

·         Culture on cystin glucose agar

·         BCYT= buffered charcoal yeast extract.


 

 

 

Haemophilus

 

 

-the family pasteurllaceae spp are 1)Haemophilus

2)Actinobacillus 3)Pasteurella

 

-the members of this family are:

*Small gram-negative

*Non-spore

*Nonmotile

*Aerobic or facultative anerobic rods

 

-most members of this family have fastidious growth needs, requiring enriched media for growth.

 

-members of the genus Haemophilus are the most commonly and significant human pathogen.


influenzae Haemophilus 

 

 

 

Characteristics

·         Gr –ve bacilli (coccobacilli)

·         Non sporing , non  moitile ,

·         The surface of many(but not all) strains of H.influenzae is covered with polysaccharide capsule.

·         Facultative anaerobes

·         Haemophillic bacteria

·         Pyogenic (pus –producing ) bacteria

·         Plemorphic.

·         Is the most species of Haemophilus that cause disease.

·         The cell wall structure is typical of other gran- negative rods(lipopolysaccharide with endotoxin activity is present in thecell wall.

·         Is fermentive.

 

Habitat

·         Human upper respiratory tract as anormal flora but many also cause respiratory disease , usually as secondary invader

 

Transmission

·         Airborne route

 

 

Pathogenesis

·         Endotoxin = causing damage to the epithelial cell of the upper respiratory tract

·         Capsule = antiphagocytosis

·         IgAase = degrades IgA antibodies that is key host defense mechanism in mucous membrane

·         H.influenzae type b is most virulent with RPR(polyribitol phosphate) in capsule

·         Pili=adhere to host cells.

 

 

 

Diseases

·         Cause severe infection in children ( acute meningitis )

·         H.influenzae serotype was responsible for more than 95% of all Haemophilus infection.

·         Serotypes C and F and noncapsulated


 

H.influenzae diseases.

·         Cause chronic , less severe infection beyond age 6 (,pneumonia,Otitis media , sinusitis , bronchitis ) in older children and adult

·         This bacteria is the most common cause of bacterial meningitis in children from 5 months to 5 years of age

·         Mortality rate of untreated H. influenzaw meningitis may be up to 90%

·         Act synergistically with viral infection ,

predisposing to severe haemophilus infection , the incidwnce increase during influenza outbreaks

 

Laboratory Identification

·         Require enriched media such as blood or chocolate agar or(Levinthals agar)

·         Need both od tow growth factor (factor V-X)

1.      heat stable X factor = hemin or some other iron – containing prophrin

2.      heat stable V factor = nicotinamide adenine nucleotide (NAD)

·         grow poorly in the absence of oxygen & growth is enhancedin an atmosphere with add CO2

·         on chocolate or blood agar : a streak of staph . aureus across the plate produce V factor and enlarges the size of adjacent colonies of H . inflluenzae = satellitism phenomena

·         colonies are small , translucent , non hemolytic

·         microscopy is sensitive test for detecting

H.influenzae in(cerebrospinal fluidCSF .synovial fluid, and lower respirtory specimens.


aeruginosa Pseudomonas

 

Characteristics

·         Gr –ve bacilli arranged in pairs.

·         Non sporing , motile , capsulate (polysaccharide)

·         Obligae aerobes

·         Nonfermentative.

·         The presence of cytochrome oxidase(detected in rabid,5minute test) in pseudomonas species is used to differentiate them from the Enterobacteriaceae

·         Some pseudomonas produce diffusible pigments (e.g.pyocyanin [blue],fluorescein[yellow],pyorubin[raddish- brown]

·         P.aeruginosa is the most common type.

 

Habitat

·         Widley distributed in water , soil & moist areas

·         Carriage as a part of normal gut flora in higher proporation of hospital inpatients

 

Transmission

·         Direct contact

·         Endogenous spread

 

 

Pathogenesis

·         Exdotoxin = cause fever , leucopenia

·         Exdotoxin A = inhibit protein synthesis

·         Exdotoxin S = inhibit protein synthesis

·         Protease & Elastase = destruction of tissue

·         Capsule=inhibits antibiotics+suppresses neutrophil and lymphocyte activity.

·         Pili=adhesin

 

 

 

Diseases

·         UTI

·         Septicemia

·         Pneumonia

·         Burn wounds & wound infection

·         Ear and eye infection

 

 

Laboratory Identification

·             Oxidase +ve , lactose fermentive

·         Identified by colonial characteristics(e.g. hemolytic, green pigment, grape like odor)

·         Grow well on macConkey agar , DCA , XLD agar

·         Commercial kits available for full identification


spp Acinetobacter       

 

 

 

Characteristics

·         Gr –ve bacilli (plump coccobacilli)

·         Non sporing , non moitile , capsulated coccobacilli

·         Strictly aerobic

·         The genus can be subdivided into two groups: 1)glucose oxidizing species(A.baumannii) 2)glucose nonoxidizing species(A.lwoffii)

 

Habitat

Survive in moist surfaces. Including respiratory therapy equipment .

And survive on dry surface including human skin(the

latter feature is unusual for gram-negative rods)

 

Transmission

·         Direct contact

·         Indirect contact via invasive devices

 

Pathogenesis

·         It has ability to colonize on internal surfaces of the invasive devices

 

 

Diseases

*pulmonary infection.

*opportunistic pathogens that cause:

Respiratory tract unfection and urinary tract infection and wound and septicemia.

 

Laboratory Identification

·         Oxidase –ve

·         Grow well on simple media


Bacteriodes             

 

 

 

Characteristics

·         Gram –Ve bacillus .

·         Obligate anaerobic .

·         Most common species is b.fragilis .

·         Polymorphic in size and shape .

·

 

 

 

Diseases

·         Intraabdominal infection .

·         Gynecologic .

·         Skin and soft tissues infection .

·         Bacteremia .

 

Laboratory Identification

·         Grow rapidly (( detected in 2 days )) .

·         Stimulated growth in 20% bile .


pertussis Bordetella     

 

 

 

Characteristics

·         Gr –Ve extremely smaal bacilli

·         Non sporing , non motile bacilli

·         Capsulate bacilli

·         Obligate aerobes

 

Habitat

Human respairatory tract

Transmission

·         airborne route

·         direct contact

 

 

 

 

 

Pathogenesis

·         tracheal cytotoxin = inhibits DNA synthesis in ciliated cells

·         fimbrial antigen (pili ) = permit the adherence of bacteria to the ciliated epithelium of the respiratory tract

·         endoxin = causing damage to the epithelial cells of the upper respiratory tract

·         pertussis toxin

 

 

Diseases

·         whooping cough (pertussis ) by Bordetella pertussis.

·         Mild pertussis by Bordetella para pertissis.

·         Respirtory disease in dogs by Bordetella bronchiseptica.

 

Laboratory Identification

·         slow growing & fastidious in its growth requirement

·         bordet – gengous agar or blood – charcoal agar

·         requires media supplemented with charcoal, starch, blood, or albumin.


 

 

·         requires 3-5 day incubation in moist atmosphere

·         it dose not require X and V factors on culure

·         oxidase amino acids.

·         Not ferment carbohydrates.

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

Differential characteristics of Bordetell species

characteristics

B.pertussis

B.parapertussis

B.bronchiseptica

oxidase

+

-

+

urease

-

+

+

motility

-

-

+

On sheep agar

-

+

+

On macConkey

agar

-

-/+

+

 

 

 

 


 

معلومات عن مزاولة مهنة التحاليل الطبية بالسعودية طبقا لنظام الهيئة السعودية للتخصصات الصحية

معلومات عن مزاولة مهنة التحاليل الطبية بالسعودية طبقا لنظام الهيئة السعودية للتخصصات الصحية من الذى يصنف اخصائى مختبر بالسعودية : 1 - كل من ...