GRAM NEGATIVE BACILLI
| spp Salmonella | |
| Characteristics | ·        
  Gr –ve bacilli ·        
  Non sporing , motile bacilli ·        
  All exept S.typhi are non – capsulate bacilli ·        
  Facultative anaerobes | 
| Habitat | ·        
  Animal gut ·        
  Human is the only natural host for S. typhi
  & S paratyphi | 
| Transmission | ·        
  Foodborne
  roote ·        
  Faecal-oral route | 
| Pathogenesis | ·        
  Endotoxin=cause fever , leukemia , hypotension
  &shock ·        
  Capsule=antiphagocytosis ·        
  Can survive within macrophages | 
| Diseases | ·        
  Typhoid fever (Enteric fever) 1.     
  bacteria rich small
  intestine and then enter lymphatics& blood streem 2.     
  cause fever , malaria ,
  headache , constipation etc 3.     
  spleen &liver become enlarged ·        
  Enterocolitis
  (gastroenteritis or food poisoning ) ·        
  septicemia | 
| Laboratory Identification | ·        
  Oxidase – ve
  , non –lactose fermentation ·        
  Produce acid &gas from glucose ·        
  Grow well on macConnkey
  agar , DCA , .S.S agar ·        
  Commercial kits available for full identification | 
| Shigella | |
| Characteristics | ·        
  Gram –Ve
  bacillus ·        
  Faculitatie anaerobic ·        
  Most shigella pathogen is S.sonnei ·        
  Non lactose fermentive . ·        
  Non motile
  . | 
| Pathogenesis | ·        
  Endotoxin ·        
  Capsule ·        
  Antigenic phase variation . | 
| Diseases | ·        
  Gastroenteritis (( shigellosis )) ·        
  S.dysenteriae cause bacterial dysenteria | 
| Laboratory Identification | ·        
  Oxidase –
  Ve ·        
  Isolation from specimens
  requires use of selective media . | 
Vibrio
-the second major group of
gram-negative ,facultative anaerobic, fermentative rods.
- Were separated
from Enterobacteriaceae on the basis of positive oxidase reaction and the
presence of polar flagella.
-the most important members of Vibrio spp are:
1) Vibrio cholera.
2) Vibrio parahaemolyticus.
3)Vibrio vulnificus.
-Vibrio species can grow on a
variety of simple media within temp rate (14-40C).
V.cholerae can
grow in the absence of salts(most other species of vibrio that are pathogenic
in human require salt [halophilic species]).
-Vibrio tolerate a wide range of
PH (e.g.PH of 6.5-9.0) but are susceptible to stomach acids. If gastric acid
production is reduced or neutralized , patients are more susceptible to Vibrio
infection.
-most vibrio have
asingle polar flagella (in contrast with peritrichous flagella in the family
Enterobacteriaceae.
-vibrio have also various pili
that are important for virulence.
-epidemic
strains of V.cholerae the etiologic agent of cholera
| cholerae Vibrio | |
| Characteristics | ·        
  Small , curved (comma – shapped ) ·        
  Gr –ve bacilli ·        
  Non sporing , motile
  bacilli , non capsulate bacilli ·        
  Facultative anaerobes ·        
  Were separated from Enterobacteriaceae on the basis of positive oxidase
  reaction and the presence of polar flagella. | 
| Habitat | ·        
  Contaminated water
  (usually) or food (sometimes ) | 
| Transmission | ·              
  Foodborne route ·        
  Faecal – oral route | 
| Pathogenesis | ·        
  Choleragen enterotoxin =
  hypersecretion of electrolytes andwater. | 
| Diseases | ·        
  Cholera 1.     
  bacteria colonize the
  intestinal tract in very high numbers 2.     
  bacteria attach to but do not invade the intestinal mucosa 3.     
  intese vomiting & diarrhea 4.      severe
  loss of water &electrolytes *gastroenteritis | 
| Laboratory Identification | ·        
  Oxidase +ve ·        
  Commercial kits available for full identification ·        
  Special selective media for vibrio thiusulfate citrate bile
  salts sucrose(TCBS). ·        
  Do not require salts for growth. But can
  tolerate it. | 
|  | ·        
  Vibrio cholerae are rarely
  seen in Gram-stained stool or
  wound specimens. ·        
  By using darkfield
  microscope may able to detect the motile bacteria in stool specimen. | 
Enterobacteriaceae SPP.
-the family Enterobacteriaceae is the largest,
most heterogeneous collection of medically important gram-negative rods.
-fewer than
20 species are responsible for more than 95% of the infection.
-Enterobacteriaceae are ubiquitous organisms, found
worldwide in soil,water,vegetation.
-Enterobacteriaceae
part of the normal intestinal flora of most human.
-these bacteria cause a variety of human diseases
including 30-35% of all septicemia, more than 70% of urinary tract infection ,
and many intestinal infections.
-some organisms(e.g.salmonella typhi, shiglla,
yersinia pestis) are always associated with disease.
-while other organisms(e.g. E.coli, klebsiella
pneumoniae, protus mirabilis) are members of the normal commensal flora that
can cause opportunistic infections.
-members of the Enterobacteriaceae family are
moderately in size, gram-negative rods .
-they share a co
mmon antigen (enterobacterial common antigen)
-are either nonmotile or motile with peritrichous
flagella
-do not form spore.
-all members can grow rabidly, facultative
anaerobic) on variety of nonselctive media(e.g.blood agar) and selective
(e.g.macConkey agar).
-the Enterobacteriaceae have simple nutritional
requirements, ferment glucose.
-catalase
+ve, oxidase –ve.
-the absence of cytochrome oxidase activity is
important characteristic , because it can be measured rabidly with simple test
and is used to distinguish the Enterobacteriaceae from many other fermentative
and nonfermentative gram-negative rods.
-a few exceptions to these rules exits (e.g.
plesiomonas shigelloides is oxidase +ve, klebsiella
granulomatis can not be cultured on traditional
media.
-the ability to ferment lactose has been used to differentiate
lactose-fermenting strains(e.g.
Echerichia, klebsiella, enterobacter, citrobacter ,
serratia spp) from strains that do not ferment lactose or do so slowly(e.g.
proteus, salmonella, shiglla, yersinia spp).
-resistance to bile salts in some selective media
has been used to separate enteric pathogen(e.g. shigella, salmonella) from
commensal organisms that are inhibited by bile salts(e.g. gram+ve and some
gram-ve bacteria present in the gastrointestinal tract)
-some Enterobacteriaaceae have prominent capsules
(e.g. most klebsiella, some Enterobacter, Escherichia strains),
-the heat-stable lipopolysaccharide(LPS) is the
major cell wall antigen.
-most the Enterobaceriaceae are motile with the
exception of the common isolates Klebsiella, shigella, yersinia.
-the motile strains posses peritrichous flagella.
-there are other species of Enterobacteriaceae :
1)Enterobacter
2)Citrobacter 3)Serratia 4)Morganella
-These species subdivide as lactose fermenter Enterobacteriaceae.
-these
species caused infections rarely in immunocompetent patients.
-they are more common causes of immunocompromised
patients.
-e.g.
citrobacter koseri cause meningitis and brain abscesses in neonates.
| coli Escherichia           | |
| Characteristics | ·        
  Gr –ve bacilli ·        
  Non sporing , motile , non
  capsulated bacilli but some strains are capsulate ·        
  Facultative anaerobes | 
| Habitat | ·        
  Common normal flora of human intestinal tract | 
| Transmission | ·        
  Foodborne route ·        
  Faecal – oral route ·        
  Endogenous
  spread | 
| Pathogenesis | ·        
  Endotoxin = cause fever , leucopenia ·        
  Capsule (in some strains ) = antiphagocytosis ·        
  Enterotoxin = cause diarrhea | 
| Diseases | ·        
  Urinary tract infection (UTI) ·        
  Diarrhoeal
  disease ·        
  Neonatal
  meningitis ·        
  Septicemia ·        
  Gastroenteritis. | 
| Laboratory Identification | ·        
  Oxidase –ve , lactose fermentive ·        
  Grow well on macConkey
  agar , DCA , XLD agar ·        
  Commercial kits available for full identification | 
                    
|      spp Proteus | |
| Characteristics | ·        
  Gr –ve bacilli ·        
  Non sporing highly motile , non capsulate bacilli ·        
  Facultative anaerobes ·        
  P.mirabilis is the most common species. ·        
  Produce large quantitiesof
  urease.(this process raises the urine PH and facilitates the formation of
  renal stones , the increased alkalinity of the
  urine is also toxic. | 
| Habitat | Common normal flora of the human intestinal tract | 
| Transmission | ·            
  Foodborne route ·        
  Faecal – oral route ·        
  Endogenous
  spread | 
| Pathogenesis | Endotoxin = cause fever , leucopenia | 
| Diseases | ·        
  UTI ·        
  Septicemia | 
| Laboratory Identification | ·              
  Oxidase –ve , non lactose fermentive ·        
  Grow well on macConkey
  agar , DCA , XLD agar ·        
  Swarming colonies on solid media ·        
  Commercial kits available for full identification | 
| pestis Yersinia | |
| Characteristics | ·       
  Gr –ve bacilli
  (cocobacilli ) (facultative
  anaerobes) ·       
  Have a tendency for bipolar staining (in which the endof
  the bacilli stain darker than the central part) ·       
  Nonsporing , non motile
  bacilli . capsulate bacilli ·       
  Some species (e.g.Y.enterocolitica)
  can grow at cold temp. | 
| Habitat | ·       
  Animal reservoirs are rodents such as rats | 
| Transmission | ·       
  Bacteria spreads between anmals by fleas ·       
  Major outbreaks in humans
  result from exposure to infected rats ·       
  The rat flea carries
  infection from rat to rat &
  from rat to human ·       
  Bubonic plague is not transmitted from person to person ·       
  Pneumonic plague spread
  from person to person by droplets
  (airborne route ) | 
| Pathogenesis | ·       
  Intracellular murine toxin
  = causing irreversible shock and
  death ·       
  Capsule (f1) = antiphagocytosis ·       
  The V/M antigen = specific protein act as antiphagocytosis & promote
  intracellular growth of the bacteria | 
| Diseases | PLAGUE : 1.    
  is normally
  azoonotic disease of rodents that exists in 2 kinds of epidemic centers 2.    
  permanent but relatively
  resistant rat population (wild rat) 3.    
  temporary but susceptible
  rat population (domestic rats ) 4.    
  epidemics of plague
  usually occur in crowded areas
  poor sanitation ·       
  bubonic plague : 1.    
  bacteria multiply at the entery site in the
  skin 2.    
  bacteria spread via the
  lymphatics to lymph
  nodes 3.    
  2 to 6 days after the flea bite occurs , lymph nodes become very tender , and enlarge to form buboes with haemorrhagic
  inflammation 4.    
  death rate is about 75% in untread bubonic plague ·       
  pneumonic plague (black death) : 1.    
  bacteria disseminates from lymph nodes by way of the | 
|  | bloodstream
  to the spleen , liver ,l lungs 2.    
  pneumonic plague can be transmitted by respriatory route but Iis 3.    
  death tate is nearly
  100%in untreaed pneumonic plague | 
| Laboratory Identification | ·       
  stained smears should show bipolar staining ·       
  organism can be grow from
  aspirtes of enlarged buboes , or from sputum in case of pneumonic plague ·       
  colonies are grayish ,
  mucoid & rough colonies may be noted ·       
  the organism are not
  fastidious ; it can be rrown on
  routine media ·       
  oxidase –ve . | 
| Pasteurella                 | |
| Characteristics | ·        
  Garm –Ve
  bacillus ·        
  Non spore
  forming ·        
  Non motile ·        
  Faculitative anaerobic ·        
  Fermentative coccobacilli . ·        
  Most common P.multocida and P.canis | 
| Habitat |  | 
| Transmission |  | 
| Pathogenesis |  | 
| Diseases | ·        
  Bite wound infection . ·        
  Chronic pulmonary disesase ·        
  Bacteremia ·        
  Meningitis | 
| Laboratory Identification | ·        
  Grow well in blood and choclate agar . and poorly in macConkey agar . ·        
  After over night
  incubation in blood agar large
  buttery colonies with musty odor cuase by product indole | 
| pneumoniae Klebsiella    | |
| Characteristics | ·        
  Gr –ve bacilli ·        
  Non sporing , non motile ,
  prominent capsulate that responsible for the
  mucoid. ·        
  Facultative anaerobes ·        
  Formerly called (Donovaina granulomatis) | 
| Habitat | ·        
  Common normal flora of the
  human intestinal tract & oropharynx | 
| Transmission | ·        
  Foodborne
  route ·        
  Faecal – oral route ·        
  Endogenous
  spread | 
| Pathogenesis | ·        
  Endotoxin = cause fever , leucopenia ·        
  Capsule =
  antiphagocytosis | 
| Diseases | ·        
  UTI ·        
  Neonatal
  meningitis ·        
  Septicemia ·        
  Pneumonia (Rare ) | 
|  | ·            
  Oxidase –ve , lactose fermentive | 
| Laboratory Identification | ·        
  Grow well on macConkey agar , DCA , XLD
  agar | 
|  | ·        
  Large mucoid colonies | 
|  | ·        
  Commercial kits available for full identification | 
| spp Brucella               | |
| Characteristics | ·        
  Gr –ve small coccibacilli ·        
  Non sporing ,non motile , non capsulated bacilli ·        
  Intracellular pathogen ·        
  Slow growth requirements ·        
  Fastidious. ·        
  Is member of the alpha –proteobacteria group ·        
  Strictly
  aerobic ·        
  Does not ferment carbohydrates. ·        
  Four species: 1)Brucella
  abortus 2)Brucella melitensis. 3)Brucella
  suis     4)Brucella canis | 
| Habitat | ·        
  Chronic infection in domestic animals | 
| Transmission | ·        
  Contaminated milk or other unpasteurized dairy
  products ·        
  Direct contact | 
| Pathogenesis | ·        
  Invasion of the body by
  brucella results in lymphatic
  dissemination of the bacteria ·        
  As regional lymph nodes
  become infected , the brucella are phagocytized , but they are capable of survive & intracellular
  multiplication inside phagocytic cells ·        
  As phagocytic cells die ,
  brucella , are released into the blood stream and intracellularly , establish
  localized infection in bone marrow
  , liver &spleen , and thus hide from host defence | 
| Diseases | ·        
  Undulant fever (malta fever or brucellosis ) 1.      patients
  frequently present with PUO 2.     
  chronic , debilitating
  febrile illness usually without any localizing signs 3.     
  intracellularly , bacteria localize and cause | 
|  | granulomas
  lesions in the spleen , liver bone marrow & lymph nodes 4.     
  patients presents with
  intermittent fever & profound
  weakness , chills , sweats , headache , backache 5.     
  two types of infection
  occur ; (acute infection ) or (chronic infection – lasting 12 months ) | 
| Laboratory Identification | ·        
  requiring complex growth
  media like :glucose serum or liver infusion broth or agar ·        
  usuakky require 3-5 days incubation ·        
  blood provides the best material for culture ·        
  grow occasionally on MacConkey agar. ·        
  Oxidase +ve ·        
  Urease+ve | 
| tularensis Francisella | |
| Characteristics | ·        
  Gr – Ve small bacilli (coccobacilli) ·        
  Often showing bipolar staining ·        
  Non motile , non sporing , capsulate , coccobacilli ·        
  Strick aerobic ·        
  Fastidious. ·        
  Two species of Francisella spp: 1)F.tularensis 2)F.philomiragia *require cystein for growth. | 
| Habitat | Widely found in animal reservoirs | 
| Transmission | ·        
  biting arthropods ·        
  direct contact with infected animal tissue ·        
  ingestion of contamination food or water ·        
  inhalation of aerosols | 
| Pathogenesis | ·        
  F.tularensis is highly infection ; penrtration of the
  skin or mucous membranes or inhalation of 50 organism can result in infection ·        
  F.tularensis is an intracellular pathogen of
  phagocytosis cells ·        
  Capsule= phagocytosis | 
| Diseases | ·        
  tularemia (sometimes
  called rabbit fever or glandular fever or tick fever or deer fly fever ): 1- clinical presentation dependes on the route of infection 2-   a
  plague – like disease of rodents | 
| Laboratory Identification | ·        
  blood is
  taken for serological tests ·        
  growth dose not occur in most ordinary bacteriological media
  but small colonies appear in 1-3
  day on glucose , blood agar incubated at 37
  C under aerobic conditions ·        
  culture on
  cystein-supplemented media(e.g.choclate agar, BCYE agar ) is specific. ·        
  Culture on cystin blood agar. ·        
  Culture on cystin glucose agar ·        
  BCYT= buffered charcoal yeast extract. | 
Haemophilus
-the family
pasteurllaceae spp are 1)Haemophilus
2)Actinobacillus 3)Pasteurella
-the members
of this family are:
*Small
gram-negative
*Non-spore
*Nonmotile
*Aerobic or facultative anerobic rods
-most members of this
family have fastidious growth
needs, requiring enriched media for growth.
-members of the genus Haemophilus
are the most commonly and
significant human pathogen.
| influenzae Haemophilus   | |
| Characteristics | ·        
  Gr –ve bacilli (coccobacilli) ·        
  Non sporing , non  moitile
  , ·        
  The surface of many(but
  not all) strains of H.influenzae is covered with polysaccharide capsule. ·        
  Facultative anaerobes ·        
  Haemophillic bacteria ·        
  Pyogenic (pus –producing ) bacteria ·        
  Plemorphic. ·        
  Is the most species of
  Haemophilus that cause disease. ·        
  The cell wall structure is typical of other gran- negative rods(lipopolysaccharide with endotoxin
  activity is present in thecell wall. ·        
  Is fermentive. | 
| Habitat | ·        
  Human upper respiratory
  tract as anormal flora but many also cause respiratory disease , usually as
  secondary invader | 
| Transmission | ·        
  Airborne
  route | 
| Pathogenesis | ·        
  Endotoxin = causing damage
  to the epithelial cell of the upper respiratory tract ·        
  Capsule =
  antiphagocytosis ·        
  IgAase = degrades IgA
  antibodies that is key host
  defense mechanism in mucous membrane ·        
  H.influenzae type b is most virulent with RPR(polyribitol
  phosphate) in capsule ·        
  Pili=adhere to host cells. | 
| Diseases | ·        
  Cause severe infection in children ( acute meningitis ) ·        
  H.influenzae serotype was
  responsible for more than 95% of all Haemophilus infection. ·        
  Serotypes C and F and noncapsulated | 
|  | H.influenzae diseases. ·        
  Cause chronic , less
  severe infection beyond age 6
  (,pneumonia,Otitis media ,
  sinusitis , bronchitis ) in older
  children and adult ·        
  This bacteria is the most common cause of bacterial
  meningitis in children from 5
  months to 5 years of age ·        
  Mortality rate of
  untreated H. influenzaw meningitis may be
  up to 90% ·        
  Act synergistically with viral
  infection , predisposing to severe
  haemophilus infection , the incidwnce increase during influenza outbreaks | 
| Laboratory Identification | ·        
  Require enriched media such as blood or chocolate agar
  or(Levinthals agar) ·        
  Need both od tow growth factor (factor V-X) 1.     
  heat stable X factor = hemin or some other iron
  – containing prophrin 2.     
  heat stable V factor = nicotinamide adenine nucleotide (NAD) ·        
  grow poorly in the absence of oxygen & growth is enhancedin
  an atmosphere with add CO2 ·        
  on chocolate or blood agar
  : a streak of staph . aureus across the plate produce V factor and enlarges
  the size of adjacent colonies of H . inflluenzae = satellitism phenomena ·        
  colonies are small , translucent , non hemolytic ·        
  microscopy is sensitive test for detecting H.influenzae
  in(cerebrospinal fluidCSF .synovial fluid, and lower respirtory specimens. | 
| aeruginosa Pseudomonas  | |
| Characteristics | ·        
  Gr –ve bacilli arranged in pairs. ·        
  Non sporing , motile , capsulate (polysaccharide) ·        
  Obligae aerobes ·        
  Nonfermentative. ·        
  The presence of cytochrome
  oxidase(detected in rabid,5minute
  test) in pseudomonas species is used to differentiate them from the
  Enterobacteriaceae ·        
  Some pseudomonas produce
  diffusible pigments (e.g.pyocyanin
  [blue],fluorescein[yellow],pyorubin[raddish- brown] ·        
  P.aeruginosa is the most common type. | 
| Habitat | ·        
  Widley distributed in water , soil & moist areas ·        
  Carriage as a part of normal gut flora in higher proporation of hospital inpatients | 
| Transmission | ·        
  Direct contact ·        
  Endogenous
  spread | 
| Pathogenesis | ·        
  Exdotoxin = cause fever , leucopenia ·        
  Exdotoxin A = inhibit protein synthesis ·        
  Exdotoxin S = inhibit protein synthesis ·        
  Protease & Elastase = destruction of tissue ·        
  Capsule=inhibits
  antibiotics+suppresses neutrophil and lymphocyte activity. ·        
  Pili=adhesin | 
| Diseases | ·        
  UTI ·        
  Septicemia ·        
  Pneumonia ·        
  Burn wounds & wound infection ·        
  Ear and eye infection | 
| Laboratory Identification | ·            
  Oxidase +ve , lactose fermentive ·        
  Identified by colonial
  characteristics(e.g. hemolytic, green pigment, grape like odor) ·        
  Grow well on macConkey
  agar , DCA , XLD agar ·        
  Commercial kits available for full identification | 
| spp Acinetobacter         | |
| Characteristics | ·        
  Gr –ve bacilli (plump coccobacilli) ·        
  Non sporing , non moitile
  , capsulated coccobacilli ·        
  Strictly
  aerobic ·        
  The genus can be subdivided into two groups: 1)glucose
  oxidizing species(A.baumannii) 2)glucose nonoxidizing species(A.lwoffii) | 
| Habitat | Survive
  in moist surfaces. Including respiratory therapy equipment . And survive on dry surface including human skin(the latter feature is unusual for gram-negative rods) | 
| Transmission | ·        
  Direct contact ·        
  Indirect contact via invasive devices | 
| Pathogenesis | ·        
  It has ability to colonize on internal surfaces of the
  invasive devices | 
| Diseases | *pulmonary infection. *opportunistic pathogens that cause: Respiratory tract unfection and urinary tract infection and wound and
  septicemia. | 
| Laboratory Identification | ·        
  Oxidase –ve ·        
  Grow well on simple media | 
| Bacteriodes               | |
| Characteristics | ·        
  Gram –Ve bacillus . ·        
  Obligate anaerobic . ·        
  Most common species is b.fragilis . ·        
  Polymorphic in size and shape . · | 
| Diseases | ·        
  Intraabdominal infection . ·        
  Gynecologic . ·        
  Skin and soft tissues infection . ·        
  Bacteremia . | 
| Laboratory Identification | ·        
  Grow rapidly (( detected in 2 days )) . ·        
  Stimulated growth in 20% bile . | 
| pertussis Bordetella       | |
| Characteristics | ·        
  Gr –Ve extremely smaal bacilli ·        
  Non sporing , non motile bacilli ·        
  Capsulate
  bacilli ·        
  Obligate
  aerobes | 
| Habitat | Human respairatory tract | 
| Transmission | ·        
  airborne
  route ·        
  direct contact | 
| Pathogenesis | ·        
  tracheal cytotoxin =
  inhibits DNA synthesis in ciliated cells ·        
  fimbrial antigen (pili ) =
  permit the adherence of bacteria to the
  ciliated epithelium of the respiratory tract ·        
  endoxin = causing damage
  to the epithelial cells of the
  upper respiratory tract ·        
  pertussis
  toxin | 
| Diseases | ·        
  whooping cough (pertussis
  ) by Bordetella pertussis. ·        
  Mild pertussis by Bordetella para pertissis. ·        
  Respirtory disease in dogs by Bordetella bronchiseptica. | 
| Laboratory Identification | ·        
  slow growing &
  fastidious in its growth
  requirement ·        
  bordet – gengous agar or blood – charcoal agar ·        
  requires media supplemented with charcoal,
  starch, blood, or albumin. | 
|  | ·        
  requires 3-5 day incubation in moist atmosphere ·        
  it dose not require X and V
  factors on culure ·        
  oxidase amino acids. ·        
  Not ferment carbohydrates. | 
Differential
characteristics of Bordetell species
| characteristics | B.pertussis | B.parapertussis | B.bronchiseptica | 
| oxidase | + | - | + | 
| urease | - | + | + | 
| motility | - | - | + | 
| On sheep agar | - | + | + | 
| On macConkey agar | - | -/+ | + | 
|  |  |  |  | 
 
